Links

From Jie Wu Home Page

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==Differential expression==
 
==Differential expression==
  
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*[http://www.bioconductor.org/packages/release/bioc/html/edgeR.html edgeR]
 
*[http://cufflinks.cbcb.umd.edu/manual.html Cuffdiff]
 
*[http://cufflinks.cbcb.umd.edu/manual.html Cuffdiff]
 
*[http://www-huber.embl.de/users/anders/DESeq/ DESeq]
 
*[http://www-huber.embl.de/users/anders/DESeq/ DESeq]

Revision as of 20:39, 10 August 2014

Contents

Programs about mRNA-seq

I only listed programs I use regularly, for a more complete list, please check [[1]].

QC

Mapping

Processing

Quantification

Differential expression

Useful websites about splicing

Communities